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Is the Kobo's database used to manage sideloaded books as well?
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It is highly probable that the database is used to manage all of the file types on the Touch.
Books: EPUB, PDF and MOBI
Documents: PDF
Images: JPEG, GIF, PNG, BMP and TIFF
Text: TXT, HTML and RTF
Comic Books: CBZ and CBR
The database would probably keep track of attributes such as title, author, file type, status etc