The Windows only companion software that is on the SD card in your DR1000s. It's "use" and I say that with a pinch of salt, is detailed in the documentation.
The merge function from iRex does leave a lot to be desired, I too find it very "rough". The alternative merge softwares developed by others and found within this forum are streets ahead at present. I think packaged versions for Windows and Mac are available if you read the forum on scribble merging.
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