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Originally Posted by dwanthny
I believe just the new books would be missing.
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This is correct. I've done it a few times.
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Save metadata in OPF file
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In the event of catastrophic failure you could start fresh and add these to calibre with the all of the metadata following along.
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Be aware that the new user-defined metadata is not yet stored in the opf file. It's on the ToDo list (unless it's been completed recently and I missed it)