That is one horrible conversion, or someone has fiddled with it afterwards. There is lots of text outside paragraph tags.
I found a couple of places that did what you describe. In each case, it was going to the beginning of the html file. I am fairly sure that what is happening is the structure of the html files is wrong. But, I don't know why the calibre conversion created this.
I tried a conversion and got a very different result. I didn't see this problem with it. One of the differences is that my version split on chapters. The structure of the html files is better, but I didn't try removing the page headings.
For your conversion, maybe try reducing the value of "Split files larger than".
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