The Kobo can be discommected the same way as any other removable device can; within Windows, go to the system tray in the bottom right and look for the little icom for Removable Devices and click that, or go to Windows Explorer, right click on the drive for the Kobo and select Eject.
What version of ADE are you using, and on what platform? ADE 2.0 is the newest and is a bit dikfferent from ADE 1.x.
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