Hello Jean-Christophe,
It seems this is a bug in OneDrive actually. The way the iOS app finds libraries is to search your drive for files called "metadata.db". I've just added a 2nd library to my OneDrive, and as you reported, CC couldn't find it. However, if I log in and search OneDrive via their website, it still only reports one file called "metadata.db", despite there actually being two.
So... this means OneDrive's searching assumes there will only ever be one file with a certain name. Unless there's some way to fix that with OneDrive there's no way for CC to know that the other libraries exist.
Sorry!
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