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Sorry, the message about the wrong length is misleading, I think. I've not appended anything to the kernel and it worked. It's just a not-really-tested path, but I think only addresses must fit to 512 byte boundaries. For lengths it does not matter.
The real problem are the last both lines, indicating ... well, I don't know. Could it be that the RAM kernel image got somehow corrupted? It seems that the ROM kernel is answering (4-byte replies) when the RAM kernel (8-byte replies) should. Somehow it seems the RAM kernel wasn't started.
I suggest to reset the device if you haven't already. Just pull power slider for >15secs, remember to keep Vol- pressed when you release the slider. Personally, I use "watch lsusb" in a terminal on the host machine to monitor the reboot.
I'll upload another version of the software in a minute, but there weren't related bugs in the old version, so it would not fix this, I think. It's mainly new features.
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