I have rechecked one of the files. And it seems to be a mess. Reopened by Sigil (both beta and stable) it does not show any file under "text". Yet that HTML is quite Ok from a quick check. And the text file is in the right place once I open the epub in a zip tool. Sadly, I can't share it as it is copyrighted work and that is a private copy. And, for the time, I can't investigate it any further by generating a dummy HTML and trying to come up with the same results.
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