If it helps any, you don't have to convert from PRC to MOBI to put it on the K2, it will read either of them.
In Calibre I had the "sentences are split up" problem and was able to fix it by changing the "Line Un-Wrapping Factor" to be .25 instead of 0 in the "Preferences->Conversion->PDF Input" tab.
There is also a section under "Preferences->Conversion->Table of Contents" that has some stuff about generating table of contents automatically. I have not used that feature at all though so I cannot really comment on it much other than that it might be helpful for ya.
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