DVC, if you think Calibre's conversions don't do a proper job, please grab the source code, fix the converter code , and forward the patch to Kovid. I'm sure he'd appreciate the help.
Other than that, please carefully read the comments others with multiple years of experience have posted and try some of them.
Conversion has issues. Can WordPerfect or OpenOffice perfectly convert all .doc or .docx files? For that matter, can Firefox properly display web sites coded for IE?
Yes, there are standards, but some programs don't implement them properly, or implement only parts.
Please don't complain so much about an Open Source product that you're getting for free. Even the commercial programs don't do a perfect job and you're paying for those!
If you want to get really high quality conversions, pay a professional to do it. Then you can complain to them all you want about the conversions quality.
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