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You can open up to 100 documents in Atlantis simultaneously. In the "File | Open..." window of Atlantis you can use Ctrl+Click or Shift+Click to select multiple documents. Or select the desired documents in Windows Explorer, and open them in Atlantis with drag & drop (capture the selected files in Windows Explorer with the mouse, then drag to the Atlantis window, and drop onto the Atlantis toolbars, document bar, or status bar).
When you have a document open in Atlantis, you can press the following keys and key combinations to convert it to EPUB, and switch to another open document:
1) Press F11 (or another hot key that you assigned to the "Save as eBook" command).
2) Press Enter to confirm the filename for your EPUB.
3) Press Enter to "click" the "OK" button in the "Save as eBook" window.
4) Press Ctrl+W to close the active document of Atlantis.
So only 4 key presses are needed to save the active document as EPUB, and close it:
F11
Enter
Enter
Ctrl+W
Just repeat the above 4 steps (4 key combinations), and you could convert hundreds of documents in minutes.
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