I have completely uninstalled Calibre. After fresh install with default values I get this console output (start, install dialog and close) and gui.py (the interface is still wrong).
Code:
27.12.09 19:10:57 kernel CoreServicesUIAg[734] Unable to clear quarantine `Frameworks': 93
27.12.09 19:10:57 kernel CoreServicesUIAg[734] Unable to clear quarantine `MacOS': 93
27.12.09 19:10:57 kernel CoreServicesUIAg[734] Unable to clear quarantine `Resources': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `phonon': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtCore': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtGui': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Resources': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtNetwork': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtSvg': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtWebKit': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtXml': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `QtXmlPatterns': 93
27.12.09 19:10:58 kernel CoreServicesUIAg[734] Unable to clear quarantine `Current': 93
27.12.09 19:13:18 [0x0-0x47047].net.kovidgoyal.calibre[732] link hasn't been detected!
27.12.09 19:13:18 [0x0-0x47047].net.kovidgoyal.calibre[732] link hasn't been detected!
27.12.09 19:13:20 [0x0-0x47047].net.kovidgoyal.calibre[732] QWidget::setMinimumSize: (/StatusBar) The largest allowed size is (16777215,16777215)
27.12.09 19:13:20 [0x0-0x47047].net.kovidgoyal.calibre[732] QWidget::setMinimumSize: (/StatusBar) The largest allowed size is (16777215,16777215)
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 2...
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 3...
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 4...
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 5...
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 6...
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 7...
27.12.09 19:13:40 [0x0-0x47047].net.kovidgoyal.calibre[732] Upgrading database to version 8...