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Assuming a ship of 200 people, and a little room for other things.... Save about 50 of the worlds prominent doctors (a mix of surgeons, pediatric doctors, midwives, and pathologists), about 25farm hands (because surprisingly they'll know how to do quite a bit with just a little), 2 "nuclear" families of each race (nuclear family: mom, dad, kid), 50 of the worlds most elite special forces (similar to farmhands in skill, but damned good at defense if its necessary). At this point we have 150ppl. Now, we should save about 10combat pilots (in the case that they can learn to fly whatever ships are there, they have some experience to start with), a random selection of 40 college students (20male, 20female, all screened for diseases).
Now, take the contents of the CDC lab in Atlanta GA, because regardless of what kind of technology these aliens have, we're likely to bring a disease with us that could wipe out half of us, and that building might just contain the cure.
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