I did what andybaby said and for me it did not work. But I noticed but I dragged and dropped the files from library to the reader they appeared in the reader window. I checked by changing the view in the library to list view and clicking on the thumbnails to open the books. On a couple of the books I made with calbre, the book was not there, just the thumbnail. Ebook library was trying to transfer abook that was not there. For some reason the file did not copy. Tried it again and all the books synchronized properly, maybe this will help someone else.
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