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Hi un_pogaz, I would but I tried using Fetch Annotations (experimental) to see if it was an alternative to the Annotations plugin and ended up having to restore my Calibre from a backup because it froze Calibre and proceded to keep refreezing Calibre every time I connected my Kobo... The upside is I backup frequently so I only lost 1 day's worth of edits and now Mass Search/Replace is back to working like it did - in hindsight, that should have been my first port of call, rather than bothering you!
However, I am now 100% sure it was Annotations causing issues. The first import of backup data failed due to the Annotations plugin (worrying for a second because calibre reverted to basics with no plugins, even on my previous library, but it was fixed by importing my backup a second time). I tested restoring a second time with the same results. Therefore, I've deleted Annotations as it's clearly causing errors across Calibre and (due to sad circumstances) it's no longer in development. KoboUtilities has a manual copy of annotations, which isn't as quick/automated, but gets the job done.
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