Quote:
Originally Posted by thiago.eec
Are you sure you followed Kovid's instructions correctly? I tested here and it worked. Pay attention to the bold part: you don't need to edit the EPUB file; just open it with the Viewer > Press ESC to open the Preferences > Styles > Paste the CSS Kovid provided > Press OK.
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I can confirm the OP's issue. It won't work. Even for the case where all the footnotes/endnotes are in a separate file, this css code forces the whole content of that html file to show in the popup window rather than only the intended aside.