I've noticed that straight after import (black screen closed), there is a variable delay before a flash of the Home/My Books screen. The new books are not immediately listed if it's showing "unread" or "all".
So if I'm updating collections or something needing a reconnection I wait till that flash before reconnecting the cable. I don't disconnect the cable after eject (desktop or Calibre on Linux) till I see the black importing screen.
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