Thanks for the replies.
It is FAT 32. I reformatted it to see if that made a difference and it's still doing the same thing.
I am just sending to main device memory. Nothing looks abnormal when the job is being done. Have wiped and re setup the Kobo and it is still doing it.
I have had previous Kobos and have not had this issue. Have the latest issue of calibre too. Very frustrating.
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