I made a fresh export from a library updated to 6.3 and all plug-ins up to date and font fixed.
I deleted the destination library and ran the Calibre 6.3 and reimported (naturally had to delete one file while import dialogue was open).
The font wasn't affected. So it's maybe only when a 5.x export is imported to 6.3 OR a 5.x Calibre is first updated to 6.3 that the GUI font is messed up and needs "reset".
All 3 systems did start with working DejaVu 10 book fonts on 5.x Calibre
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