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			If the cover is not properly marked (semantics for both the file and the image used), it is a guess. OTOH PDF uses just uses the first page. 
 
If you use the ebook editor (T),  
 
right click the image:use as cover 
Do the same for the HTML file that uses that image: 
 
Now, when you go to the Metadata Editor screen. Select the EPUB format and click the blue-blank cover button to the left, and that will bring that currently marked cover into the Library.
		 
		
	
		
		
		
		
		
		
		
		
		
		
	
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