@lomkiri: Thanks for the Linux confirmation. I was getting worried that I was the only one seeing this and I don't have my Linux-legs yet. I can't figure out from where the non-dc elements are being removed (or not removed). But, it's not the end of the world. I just reported it here in case it might help in tracking down the ToC thing.
@chaley: I confirm almost everything lomkiri said. So, I assume you don't need me to send epubs. I've had the same problem with another non-opensource book that I tried this on. The one thing I can't confirm is the permissions on the folder (I can't figure out how to do that).
I'll try the new test plugin and report back. Thanks for the work.
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