Any collections you made should sync back along with any Kobo purchased books (which you didn’t you strip of DRM and side load prior to a database corruption.
Anything sideloaded is never synced with Kobo. Though as this is generally the case with ereaders it shouldn’t be a surprise.
As to the bug it’s far more likely that Jon is right since literally no one has run into this issue and it’s been over a month since the last firmware update went out.
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