It is not an issue with firmware 4.26.16704. I don't read many comics, but, I have tested both comics in CBZ and CBR formats with no issues.
Do you get the importing screen when you disconnect the device? If so, it means the device is seeing some new books and attempting to import them. And if the don't get imported, then it usually means there is an error in a book that is preventing it from being imported and that is blocking later books from being imported.
If the import screen is not being seen, then the device is not seeing the new books. That could mean they are not there. It could also mean you have put them in a location that is not searched. With the current firmware, there is an option that can be added to the config file to prevent the device from searching some directories. If you have this, and the comics are in these directories, then the won't be seen. That could also explain why the others disappeared. You could put a comic in the root directory of the device and see if it is loaded from there.
Are other formats being imported? Are there any other problems? Such as the reading status for books being lost?
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