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For those helping out and following along. I have just pushed to the repo a new version of the user guide that has some inconsistencies cleaned up and finally passes epubcheck (at least on my machine).
Interestingly epubcheck does not appear to care about extra images in the manifest that are not used anyplace but flightcrew nicely detects these and complains.
I will be removing them to clean up space unless it turns out we need them for some of the revisions.
In the first post, I have updated the user guide epub again and added revision info so that others can figure out if it is newer than what they have now or not.
The new version is called src_updated_20210220_01.epub.
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