I merged all my branches in the default of my fork. I also updated the config defaults so COPS uses my new template as the default.
Here's the download link
https://github.com/SenorSmartyPants/...ive/master.zip
And here's the main github
https://github.com/SenorSmartyPants/cops
My repo also contains $config['cops_ignored_formats'] functionality. Check out the config_local for an example. You can use this and still use the default template if you like.