Me - single library organised into Shelves and all books tagged appropriately. I have some saved searches: Newly added books (they get a specific tag when I enter them), books to send to my e-reader (I split omnibuses and sometimes merge short stories so don't send the original imported books), and library maintenance - books to replace when I can source a better copy, books with no cover.
Beyond that, I use the left hand menu when I want to search specific tags, authors or series, sometimes publishers and formats. As with others, I clean up new imports as I go, but I batch this up as my overarching catalogue is my LibraryThing account.
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