Does it reset to cover position immediately, or only if you reopen the book?
If the latter, then don't reopen the book before sync of positions.
In the configuration, there's a checkbox "not if finished in library" that will prevent the position in the library from getting reset if you reopen the book after that.
And then maybe put a "done" tag on the book in the library too via whatever means. (I'm thinking of maybe an action chain to make that happen, but right now I do it manually.)
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