No the calibre drivers have no interaction with that. As far as calibre is concerned, the device is a USB MSD. Calibre uses the device id to identify which ereader it is, and hence which driver to used to read the book details, but, otherwise, it is just a drive.
It could be happening at the OS level, but, I doubt it. Honestly, there is no excuse for the clock in a device to be less accurate than your microwave or a non-smart watch.
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