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It probably means there is an unbalanced tag or incorrect nesting of tags towards the end of the chapter. As Kovid said, an epub-to-epub conversion will probably fix it. You can also open it in the calibre editor and run the error checking. That will probably show what it is.
As to the version downloaded from the Kobo library or to the device. They can be different versions of the book. It depends on how they get uploaded by the publisher. And the kepub version will have been through their processing. That might fix things. There are also two renderers. They handle errors in the book code in different ways.
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