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Changing it to .script works, without triggering gatekeeper. Though I have to do 'open with' - 'other' - 'enable all applications' - navigate to Terminal. I do have an option there to 'always open with', so in the future OS X would auto handle it.
If nothing else this has made patching easier for me in the future, just rename and open w/ terminal and done.
I'm not sure if it would have inherited the permission to run anyway or not. Nor am I sure if future versions would though I would somewhat hope not.
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