Quote:
Originally Posted by AliceWonder
I'm assuming that it just is simply not trying to combine them into a single file, either because there is a binary it wants not present or because there is a bug in the Linux version.
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AFAIK, Kindlegen is a standalone binary without unusual dependencies. The Linux version works just fine on my Arch Linux version. If it doesn't work on your Linux machine, it's most likely a distro/security issue. (Maybe your OS prevents Kindlegen from merging the temp files or your file manager simply doesn't refresh the folder display after Kindlegen is done.)
Try compiling a blank epub created with Sigil. If you still end up with temporary files, it's definitely an OS issue.