Well -- I just found the solution. I noticed in my post above that the override lines were indented two extra spaces. This is not what it looked like in Notepad++, so I opened the file in plain old Notepad and the extra spaces were there, too.
After saving the Notepad file, I was able to create the patch for the Kobo.
I thought that Notepad++ was the best way to edit this type of file. Apparently not.
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