Completely replacing the icon bothers me; it seems like a bit much. Putting the file name in bold would work for me, or even better maybe, putting it in italics. But even that bothers me some because I'm thinking that it'd make the list busy/noisy. The Eclipse IDE has a nice method, it modifies the icon on the left; for example, overlaying in the bottom left corner with a yellow warning triangle or a red stop sign.
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