Thanks. I did install and use the Quality Check plugin to identify comments with html formatting and I manually stripped out any embedded formatting for several hundred books last night, but just taking the html out of the comments hasn't made them show up on the nook again.
As long as the formatting in comments option is turned off in Calibre Companion, I can see them on my android devices, but on the nook, they're still just gone. And when I return CC to the default (formatting in comments checked) all the comments just disappear again.
Not sure what's going on to be honest.
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