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It could be a fun little project to automate this.
On the workstation:
Add some commands to the script that start calibre to also update a copy of the library on the server, when you exit calibre. Could use a sync app over the network.
On the server:
Run a script every 10 minutes or so. Check if a new update has arrived. If so, turn off the calibre server and update the library being served. Start the calibre server again.
You may need some semaphore files, some atomic renames and perhaps some extra copies of the library to make sure it is clean and safe.
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