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We are not talking Virtual Libraries here ? Those are VIEWS of the main
metadata.db the Library (metadata you see in the main GUI)
It is independent of other (base) Libraries . So if your issue was not a Virus or rogue A/V, those should be fine.
Now BACK to your REPAIR from backup.
metadata.db also tracks BOOKS (and their file path names).
ANY Author or Title changes made between the backup and restore, will be lost or orphaned.
RUN Library Maintenance to discover issues, the effect corrective actions
??
Compatibility issues? What OS? What OS version of calibre is installed?
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