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Then you did everything right, since you ended up with separate html files, which was the intended results of the first steps. To get the table of contents, you have to do the last step that was in my original post. The first two steps were to have separate files for each section that will later be listed in your table of contents.
Open the editor. Click on the ToC button. Click on Generate Toc from files. Then click on Ok at the bottom and exit the ToC plugin. You should now have a table of contents.
You might have to go to Preferences, Toolbars, and add the ToC (table of contents) button to your toolbar.
Adding ## to your text file won't generate the table of contents. You have to do the last step, so let me know if you still don't understand.
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