thanks for the replies.
I have looked into it and still cant determine the issue based on what you have said so far.
Auto merge added books is not enabled, auto add is not set to "all types",
I have checked the empty folder with the book viewer and file explorer. There is indeed no file in those library entries.
I failed to backup the originial database so i cant compare unfortunately.
Ive just come to terms with the fact that I cant bulk import, I'll have to break it into smaller chunks.
I'll try to replicate the situation and document it for a bug report.
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