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There are several problems with what you wish to do.
In most cases Amazon identifies books using a pair of values: CDE Type ("EBOK" for purchased books or "PDOC" for personal documents) and ASIN (10 characters for purchased books or 32 characters for personal documents). It doesn't matter what you set in your MOBI file before you email them. The values will be replaced by Amazon.
Amazon identifies positions within the book for notes and highlights with offset numbers that are very specific to each e-book produced. It is almost certain that the internal positions for books sold by Amazon will not match exactly with the same book purchased from another source and converted using calibre.
There are several ways to export notes and highlights for a book, usually with only approximate positions, called "locations" by Amazon. I don't know of any way to do the reverse and import this data. Some work toward understanding how this data is stored has been done for e-ink Kindle devices, but I haven't heard of anyone working out the internal file formats used for the Android app.
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