Any chance you could provide a sample epub that people could try out?
Reader-wise I've used Cool Reader in the past, but I generally turned off CSS to make it easier to read in gray-on-black on an AMOLED phone. Cool Reader is on Sourceforge. More recently I switched to Moon+ Reader Pro for the cross-device syncing of positions.
According to the wiki here Cool Reader supports a subset of CSS2 for selectors and properties, but if you're generating your own epub from the source code then you could presumably tweak to use only supported selectors.
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