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Yes, use the tag mapper.
For your situation above, you'd want a rule saying roughly "If the tag General is found, delete it" and one saying "If the tag "Programming Languages is found, replace it with Programming" (or vice versa, but Programming is more general than languages, so that's the direction I'd go.)
The tag mapper is available to add to the toolbar if you use it frequently, and you probably will to begin with. Otherwise, find a book, press ctrl-D, press the "configure download". From there you can configure which sources you fetch tags or anything else from, and use the "Create rules to filter/transform tags" button to open the tag mapper.
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