This might be a silly suggestion, but I've seen a few odd books where the TOC is shown correctly in Calibre and other readers at the front of the book, but on the ereader itself the TOC ends up at the end of the book. Did you check if it's possibly there stuck towards the last few pages? I think it happens when the pages are in an odd order in the .ncx or .opf pages.
Last edited by Ripplinger; 07-07-2015 at 07:36 AM.
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