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Are you configuring the KoboTouch driver or the KoboTouchExtended driver? While the extended driver depends on the main driver, it is configured separately. The debug logs shows that the extended driver is being used.
The log shows that the shelf column in the configuration is set to "#myshelves". The "#" indicates this is a custom column. The driver will treat the values in this column as the names of the collection the books should be in. When connected, the collections will be created and the books added to them. If the column #myshelves doesn't exist, or there are no values in it, then the books will not be added to any collections.
From what you say, you actually want to use the series as collections. In that case, you need to change the configuration to include the series column. Either replace "#myshelves" with "series" (it isn't a custom column, so don't use the #) or add "series" to the field separated by a comma if you also want to use the #myshelves column. This would mean you have "#myshelves, series" in the driver configuration.
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