Took the problem to the Calibre section of this forum:
Quote:
Originally Posted by kovidgoyal
The MOBI file you attached works in both Kindle Previewer and shows up on my Kindle PaperWhite.
Your problems are almost certainly caused by some MOBI file on the device that is causing the kindle indexer to crash. All files that the indexer would have gotten to after the bad file will therefore not show up. Presumably, the Kindle indexes azw3 files separately/before MOBI files.
Reset your kindle or delete everything from it manually and you should be fine.
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Reset my Paperwhite and now .mobi files show up - of course the reset wipes everything so now I have to reinstall (I'll take my time and just do a few books at a time).