I used ebooks for most of my college courses (some created by me from the paper version was the only one available). I loved being able to search the book and my annotations, the ability to highlight and add notes while also having the option to turn them off if I didn't want to be distracted by them, and really loved having a much lighter bag.
I guess it is possible that I may have retained more using the paper version instead, but I didn't have any problems with the level of retension that I did have. It worked for me.
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