I have had this problem in the past as well. It turned out that the individual pages in the epub file were really pictures, and not actual text, just pictures of the text, so the converter could not convert the file properly. All it could do was load the pages as pictures into the pdf file. Have you checked the epub file to see if the text is really text? You can do that with the edit epub function. If the pages are all pictures, short of doing an OCR on the individual pictures, I'm not sure what you could do. Maybe someone would have a better idea in this case, but let us know what you are dealing with inside the epub.
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