FWIW, several people have reported that backing up and restoring Marvin data can cause these connection issues to go away - at least with iOS 8.1 and O/S X 10.10 (Yosemite).
For my part I have deleted Marvin, then reinstalled it and started copying books back from scratch and the current IOS Reader and Marvin XD Plugins seem to be working correctly now (before I got the malformed database error). I have iPad Air, iOS 8.1, O/S X 10.10 and mid-2011 MacBook pro.
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