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@JayKindle: your problems are almost certainly related to your windows configuration. Most likely your tasks are running under different user accounts, which is why things aren't working. --shutdown-running-calibre will only work if it is run in the same user account as the other instance of calibre. And note that just because you only created a single user account does not mean there dont exist other user accounts on the system. Modern OSes typically have multiple accounts in which to run background services, for privilege sepaaration and security.
And also note that calibre has no memory leaks when you leave it running. There was a memory leak a while ago, that was fixed.
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