The update directory is empty (the "nothing to do" is telling you that there are no files to add to the zip). That means that something in "Preparing the Files" failed. At this point, it's probably easier for you to redo that section than for me to troubleshoot what exactly went wrong (you should just need to do that section, though... you shouldn't need to redo the backup). When that section's done and you try doing the zip command, the output should be a stack of files being added to the update-rooted.zip.
When I get some time, I'll redo that section and capture the output. I'll post it so you can check for differences that might indicate errors.
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