You can also re-add the books to ADE on your pc. I had an issue like yours, I deleted the books from ADE, went back and found the ascm files (or redownloaded them from the library, which at least with overdrive isn't a problem, btw), re-added them to ADE and then added again to my kobo (I'd already deleted from my kobo as well). This solved the issue of getting a transfer error while moving books to the kobo within ADE.
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